Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AL353719.1-201ENST00000566847 864 ntBASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AC233702.5-201ENST00000584107 538 ntBASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
COMMD4Q9H0A8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ABHD17AP1-201ENST00000358206 933 ntBASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AL158047.1-201ENST00000445918 881 ntBASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AC116407.2-201ENST00000613639 860 ntBASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 AC113410.3-201ENST00000623366 203 ntBASIC15.77■□□□□ 0.12
COMMD4Q9H0A8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
COMMD4Q9H0A8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 LINC00602-201ENST00000629776 2065 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms