Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 MIR3917-201ENST00000580971 93 ntBASIC16.59■□□□□ 0.25
TM9SF2Q99805 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
TM9SF2Q99805 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TM9SF2Q99805 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 AC104390.1-201ENST00000555663 520 ntBASIC16.58■□□□□ 0.24
TM9SF2Q99805 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 AC138028.4-201ENST00000564984 1845 ntBASIC16.58■□□□□ 0.24
TM9SF2Q99805 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.58■□□□□ 0.24
TM9SF2Q99805 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TM9SF2Q99805 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 AC093677.2-201ENST00000600169 1863 ntBASIC16.57■□□□□ 0.24
TM9SF2Q99805 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.57■□□□□ 0.24
TM9SF2Q99805 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 MIR3180-4-201ENST00000582223 153 ntBASIC16.57■□□□□ 0.24
TM9SF2Q99805 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.57■□□□□ 0.24
TM9SF2Q99805 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TM9SF2Q99805 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms