Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 AC138028.4-201ENST00000564984 1845 ntBASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 AC008608.2-201ENST00000606089 416 ntBASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AF238378.1-201ENST00000526806 358 ntBASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AL662844.1-201ENST00000546340 181 ntBASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AP000997.3-201ENST00000623333 2250 ntBASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 AP005117.1-201ENST00000584346 1413 ntBASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CDK5RAP1Q96SZ6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 AC104581.1-202ENST00000635932 2618 ntBASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 AC104692.2-201ENST00000603054 253 ntBASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms