Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 AP003733.1-201ENST00000491725 852 ntBASIC16.95■□□□□ 0.3
BBS4Q96RK4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 LINC01238-205ENST00000567549 1107 ntBASIC16.95■□□□□ 0.3
BBS4Q96RK4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BBS4Q96RK4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
BBS4Q96RK4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 TMPOP1-202ENST00000424642 1267 ntBASIC16.94■□□□□ 0.3
BBS4Q96RK4 KRT18P65-201ENST00000439811 1286 ntBASIC16.94■□□□□ 0.3
BBS4Q96RK4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 AC004263.2-201ENST00000617183 678 ntBASIC16.94■□□□□ 0.3
BBS4Q96RK4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 LINC01311-201ENST00000565162 1445 ntBASIC16.94■□□□□ 0.3
BBS4Q96RK4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.94■□□□□ 0.3
BBS4Q96RK4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BBS4Q96RK4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.93■□□□□ 0.3
BBS4Q96RK4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
BBS4Q96RK4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BBS4Q96RK4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BBS4Q96RK4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.93■□□□□ 0.3
BBS4Q96RK4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BBS4Q96RK4 HBZP1-201ENST00000354915 429 ntBASIC16.93■□□□□ 0.3
BBS4Q96RK4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms