Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AC004790.2-201ENST00000623588 572 ntBASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AL049812.1-201ENST00000432563 2267 ntBASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NECTIN4Q96NY8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NECTIN4Q96NY8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 MRPL20P1-201ENST00000400819 433 ntBASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NECTIN4Q96NY8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 AC003669.1-201ENST00000334569 611 ntBASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 TSEN15P1-201ENST00000423257 515 ntBASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 AC096734.2-201ENST00000562054 433 ntBASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 AL805961.1-202ENST00000641562 540 ntBASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NECTIN4Q96NY8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 KLF4P1-201ENST00000412782 1185 ntBASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 SPCS2P1-201ENST00000561636 679 ntBASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 AL031432.2-201ENST00000566714 459 ntBASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 AL928711.1-201ENST00000570165 459 ntBASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 AC027612.4-201ENST00000605371 583 ntBASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms