Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AC007613.1-201ENST00000572811 2597 ntBASIC20.85■□□□□ 0.93
TRIM47Q96LD4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 AC134684.3-201ENST00000641758 218 ntBASIC20.85■□□□□ 0.93
TRIM47Q96LD4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 AL163051.1-201ENST00000569214 1512 ntBASIC20.84■□□□□ 0.93
TRIM47Q96LD4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 DNAJB3-201ENST00000446806 729 ntBASIC20.84■□□□□ 0.93
TRIM47Q96LD4 AC068472.1-201ENST00000474589 881 ntBASIC20.84■□□□□ 0.93
TRIM47Q96LD4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 OR7E14P-202ENST00000530490 1290 ntBASIC20.84■□□□□ 0.93
TRIM47Q96LD4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM47Q96LD4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC113404.2-201ENST00000507884 177 ntBASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC009533.2-201ENST00000543664 586 ntBASIC20.83■□□□□ 0.93
TRIM47Q96LD4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC040169.1-201ENST00000565382 521 ntBASIC20.83■□□□□ 0.93
TRIM47Q96LD4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRIM47Q96LD4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM47Q96LD4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM47Q96LD4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms