Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.74■□□□□ 0.59
SMARCD1Q96GM5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 NEFHP1-201ENST00000412845 2629 ntBASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 AL390961.4-201ENST00000623958 2535 ntBASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 BX276092.7-203ENST00000637198 1536 ntBASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMARCD1Q96GM5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SMARCD1Q96GM5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms