Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
DDX11Q96FC9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX11Q96FC9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 AC012317.2-201ENST00000623305 2251 ntBASIC21.19■□□□□ 0.98
DDX11Q96FC9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX11Q96FC9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX11Q96FC9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 AC246785.2-201ENST00000432512 513 ntBASIC21.18■□□□□ 0.98
DDX11Q96FC9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 TOB2P1-201ENST00000469761 992 ntBASIC21.18■□□□□ 0.98
DDX11Q96FC9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 AC090616.6-201ENST00000582640 721 ntBASIC21.18■□□□□ 0.98
DDX11Q96FC9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 IGHV3-41-201ENST00000613121 348 ntBASIC21.18■□□□□ 0.98
DDX11Q96FC9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX11Q96FC9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX11Q96FC9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 FAAHP1-202ENST00000446499 1238 ntBASIC21.17■□□□□ 0.98
DDX11Q96FC9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX11Q96FC9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.17■□□□□ 0.98
DDX11Q96FC9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms