Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.82■□□□□ 0.44
RAB3IL1Q8TBN0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 CROCCP2-202ENST00000412962 2773 ntBASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 AC011676.5-201ENST00000624864 2660 ntBASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 AC006058.3-201ENST00000606217 1069 ntBASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 AC073195.1-201ENST00000607241 877 ntBASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RAB3IL1Q8TBN0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AL024508.2-201ENST00000607749 1894 ntBASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RAB3IL1Q8TBN0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAB3IL1Q8TBN0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms