Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 AL353135.1-201ENST00000606729 504 ntBASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.56■□□□□ 0.72
KLHDC9Q8NEP7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 GGTLC5P-201ENST00000617623 998 ntBASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 AC073592.3-201ENST00000625118 1834 ntBASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KLHDC9Q8NEP7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 MIR770-201ENST00000390219 98 ntBASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 FAM8A3P-201ENST00000427218 844 ntBASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 ACTG1P14-201ENST00000446382 1122 ntBASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 STK19B-204ENST00000512515 211 ntBASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KLHDC9Q8NEP7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC025580.3-201ENST00000617932 1424 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AL139400.1-201ENST00000366220 510 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC074386.1-202ENST00000463561 864 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AP000344.2-201ENST00000512987 629 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC092364.2-202ENST00000597012 1073 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC106028.4-201ENST00000614509 607 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC097637.2-201ENST00000624096 1997 ntBASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KLHDC9Q8NEP7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.52■□□□□ 0.72
KLHDC9Q8NEP7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHDC9Q8NEP7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KLHDC9Q8NEP7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KLHDC9Q8NEP7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms