Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AL121772.3-201ENST00000610840 674 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LINC01555Q8NAE3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 KRT126P-201ENST00000549467 1181 ntBASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 AC091304.2-201ENST00000564639 760 ntBASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC01555Q8NAE3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AC068880.1-201ENST00000507289 2297 ntBASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 FAM220CP-201ENST00000395253 831 ntBASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AL450487.1-201ENST00000426799 995 ntBASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC01555Q8NAE3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.12■□□□□ 0.33
LINC01555Q8NAE3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms