Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC104819.1-201ENST00000504587 486 ntBASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC074051.2-201ENST00000565115 352 ntBASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC012317.2-201ENST00000623305 2251 ntBASIC18.29■□□□□ 0.52
RTL3Q8N8U3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTL3Q8N8U3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 AC068880.1-201ENST00000507289 2297 ntBASIC18.28■□□□□ 0.52
RTL3Q8N8U3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL3Q8N8U3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 AC010460.3-201ENST00000511359 1579 ntBASIC18.27■□□□□ 0.52
RTL3Q8N8U3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 MINOS1P3-201ENST00000457048 203 ntBASIC18.27■□□□□ 0.52
RTL3Q8N8U3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 AC009533.2-201ENST00000543664 586 ntBASIC18.27■□□□□ 0.52
RTL3Q8N8U3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL3Q8N8U3 BCL2-203ENST00000589955 5011 ntBASIC18.27■□□□□ 0.52
RTL3Q8N8U3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.27■□□□□ 0.51
RTL3Q8N8U3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.27■□□□□ 0.51
RTL3Q8N8U3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTL3Q8N8U3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms