Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 AC103724.3-201ENST00000564481 992 ntBASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 AC092171.4-201ENST00000609130 632 ntBASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 AC023908.3-201ENST00000564211 3047 ntBASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST3H2BBQ8N257 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 MIR639-201ENST00000384974 98 ntBASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST3H2BBQ8N257 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 HLA-J-201ENST00000462773 1622 ntBASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 AC013268.4-201ENST00000637413 2228 ntBASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 GPAT2P1-201ENST00000444924 1672 ntBASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 GRK6P1-201ENST00000400595 1711 ntBASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HIST3H2BBQ8N257 AL357033.4-201ENST00000617703 1807 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms