Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AP006288.1-201ENST00000446065 395 ntBASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 IGHV3-65-201ENST00000523210 341 ntBASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
ARHGEF28Q8N1W1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 DNAJB3-202ENST00000449667 1266 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AC116407.2-201ENST00000613639 860 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AL513190.1-201ENST00000621254 727 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 FLJ13224-201ENST00000313737 1514 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 MCCD1P2-201ENST00000423228 335 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AP001160.2-201ENST00000596071 487 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 AL353135.1-201ENST00000606729 504 ntBASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ARHGEF28Q8N1W1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.51
ARHGEF28Q8N1W1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 AC090164.3-201ENST00000610780 2143 ntBASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 CRYGEP-201ENST00000412192 528 ntBASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 SIGLEC30P-201ENST00000455569 941 ntBASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 MNT-208ENST00000575394 606 ntTSL 4 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ARHGEF28Q8N1W1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 MRPL20P1-201ENST00000400819 433 ntBASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 AC092865.6-201ENST00000642101 219 ntBASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 KRT18P55-202ENST00000578578 1546 ntBASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.5■■□□□ 1.51
ARHGEF28Q8N1W1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC24.49■■□□□ 1.51
ARHGEF28Q8N1W1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC24.49■■□□□ 1.51
ARHGEF28Q8N1W1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC24.49■■□□□ 1.51
ARHGEF28Q8N1W1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC24.49■■□□□ 1.51
ARHGEF28Q8N1W1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
ARHGEF28Q8N1W1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms