Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.24■□□□□ 0.51
SIX5Q8N196 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SIX5Q8N196 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIX5Q8N196 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SIX5Q8N196 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.23■□□□□ 0.51
SIX5Q8N196 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.23■□□□□ 0.51
SIX5Q8N196 AC007967.3-201ENST00000434308 558 ntBASIC18.23■□□□□ 0.51
SIX5Q8N196 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 AC018845.2-201ENST00000568326 409 ntBASIC18.23■□□□□ 0.51
SIX5Q8N196 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.23■□□□□ 0.51
SIX5Q8N196 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.23■□□□□ 0.51
SIX5Q8N196 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
SIX5Q8N196 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SIX5Q8N196 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.22■□□□□ 0.51
SIX5Q8N196 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SIX5Q8N196 PMPCAP1-201ENST00000508114 1576 ntBASIC18.22■□□□□ 0.51
SIX5Q8N196 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 PCDHAC2-203ENST00000615316 3011 ntBASIC18.22■□□□□ 0.51
SIX5Q8N196 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 CEND1P1-201ENST00000451006 455 ntBASIC18.22■□□□□ 0.51
SIX5Q8N196 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.22■□□□□ 0.51
SIX5Q8N196 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.22■□□□□ 0.51
SIX5Q8N196 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.22■□□□□ 0.51
SIX5Q8N196 MIR4751-201ENST00000578027 74 ntBASIC18.22■□□□□ 0.51
SIX5Q8N196 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.22■□□□□ 0.51
SIX5Q8N196 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SIX5Q8N196 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 LINC01126-201ENST00000623515 1646 ntBASIC18.22■□□□□ 0.51
SIX5Q8N196 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SIX5Q8N196 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.22■□□□□ 0.51
SIX5Q8N196 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SIX5Q8N196 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 ELL2P1-201ENST00000413990 1906 ntBASIC18.21■□□□□ 0.51
SIX5Q8N196 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SIX5Q8N196 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SIX5Q8N196 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.21■□□□□ 0.51
SIX5Q8N196 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.21■□□□□ 0.51
SIX5Q8N196 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.21■□□□□ 0.51
SIX5Q8N196 AL513190.1-201ENST00000621254 727 ntBASIC18.21■□□□□ 0.51
SIX5Q8N196 AC073592.4-201ENST00000623827 446 ntBASIC18.21■□□□□ 0.51
SIX5Q8N196 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.21■□□□□ 0.51
SIX5Q8N196 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.21■□□□□ 0.51
SIX5Q8N196 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SIX5Q8N196 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms