Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 AP001269.4-201ENST00000609611 512 ntBASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCN4BQ8IWT1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 FAM220CP-201ENST00000395253 831 ntBASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 MTDHP3-201ENST00000594186 672 ntBASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 TP73-AS1-207ENST00000624167 988 ntBASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SCN4BQ8IWT1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AC097374.2-201ENST00000618617 1306 ntBASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AC010460.3-201ENST00000511359 1579 ntBASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AP000997.3-201ENST00000623333 2250 ntBASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AC100803.2-201ENST00000562459 1963 ntBASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCN4BQ8IWT1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCN4BQ8IWT1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms