Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 AC005363.2-201ENST00000618631 242 ntBASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 REXO1L11P-201ENST00000620964 1927 ntBASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 KRT89P-201ENST00000620027 1478 ntBASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 AL137013.1-201ENST00000432946 1228 ntBASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 HLA-F-220ENST00000434407 884 ntBASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 KRT18P65-201ENST00000439811 1286 ntBASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 YBX1P2-201ENST00000489612 999 ntBASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC83Q8IWF9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 AC117947.1-201ENST00000427448 529 ntBASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 AC073912.3-201ENST00000624414 853 ntBASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 AC097493.4-201ENST00000641197 219 ntBASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 PCDHA12-202ENST00000613593 2588 ntBASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 CROCCP2-202ENST00000412962 2773 ntBASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC83Q8IWF9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC83Q8IWF9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC83Q8IWF9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC83Q8IWF9 AC073508.3-201ENST00000619697 1419 ntBASIC20.95■□□□□ 0.95
CCDC83Q8IWF9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 KRT18P48-201ENST00000434763 852 ntBASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 KRT18P57-201ENST00000443599 1254 ntBASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC83Q8IWF9 AL031432.5-201ENST00000641059 760 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms