Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 AC012640.2-201ENST00000561606 901 ntBASIC19.86■□□□□ 0.77
TRIM50Q86XT4 NKAPP1-205ENST00000585790 367 ntBASIC19.86■□□□□ 0.77
TRIM50Q86XT4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 BX323043.1-201ENST00000641006 1765 ntBASIC19.85■□□□□ 0.77
TRIM50Q86XT4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 DUTP2-201ENST00000519164 463 ntBASIC19.85■□□□□ 0.77
TRIM50Q86XT4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM50Q86XT4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 AC104581.1-202ENST00000635932 2618 ntBASIC19.84■□□□□ 0.77
TRIM50Q86XT4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 BX005266.1-201ENST00000473402 457 ntBASIC19.84■□□□□ 0.77
TRIM50Q86XT4 AL139288.1-201ENST00000623748 933 ntBASIC19.84■□□□□ 0.77
TRIM50Q86XT4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 AC004817.3-201ENST00000602957 2129 ntBASIC19.84■□□□□ 0.77
TRIM50Q86XT4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM50Q86XT4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 PMS2P1-201ENST00000431037 1228 ntBASIC19.83■□□□□ 0.77
TRIM50Q86XT4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM50Q86XT4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TRIM50Q86XT4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms