Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 MIR4497-201ENST00000583208 89 ntBASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 AP000523.1-201ENST00000398242 1049 ntBASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 AC092865.7-201ENST00000641832 219 ntBASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL55Q7Z7F7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 LINC01126-201ENST00000623515 1646 ntBASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL55Q7Z7F7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms