Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 FAM58CP-201ENST00000435741 640 ntBASIC14.93□□□□□ -0.02
CSMD2Q7Z408 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 CR383656.12-201ENST00000549567 513 ntBASIC14.93□□□□□ -0.02
CSMD2Q7Z408 LINC02560-201ENST00000596379 459 ntBASIC14.93□□□□□ -0.02
CSMD2Q7Z408 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 AC099522.2-201ENST00000607001 744 ntBASIC14.93□□□□□ -0.02
CSMD2Q7Z408 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CSMD2Q7Z408 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AC074386.1-202ENST00000463561 864 ntBASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AC008667.4-201ENST00000607370 168 ntBASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AL161938.1-201ENST00000569833 2180 ntBASIC14.92□□□□□ -0.02
CSMD2Q7Z408 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSMD2Q7Z408 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 KLF2P3-201ENST00000451977 1087 ntBASIC14.91□□□□□ -0.02
CSMD2Q7Z408 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 TUBB3P1-201ENST00000405796 1332 ntBASIC14.91□□□□□ -0.02
CSMD2Q7Z408 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.91□□□□□ -0.02
CSMD2Q7Z408 AC125807.1-201ENST00000483097 614 ntBASIC14.91□□□□□ -0.02
CSMD2Q7Z408 AC008687.5-201ENST00000593746 558 ntBASIC14.91□□□□□ -0.02
CSMD2Q7Z408 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.91□□□□□ -0.02
CSMD2Q7Z408 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 BASP1P1-201ENST00000430708 665 ntBASIC14.9□□□□□ -0.02
CSMD2Q7Z408 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 AC003669.1-201ENST00000334569 611 ntBASIC14.9□□□□□ -0.02
CSMD2Q7Z408 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 ATP5G2P4-201ENST00000442175 420 ntBASIC14.9□□□□□ -0.02
CSMD2Q7Z408 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms