Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.66□□□□□ -0.86
LCA10Q71F78 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
LCA10Q71F78 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LCA10Q71F78 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
LCA10Q71F78 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC9.66□□□□□ -0.86
LCA10Q71F78 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 AL137784.3-201ENST00000623858 2288 ntBASIC9.66□□□□□ -0.86
LCA10Q71F78 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LCA10Q71F78 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
LCA10Q71F78 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LCA10Q71F78 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC9.66□□□□□ -0.86
LCA10Q71F78 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 AL009178.2-201ENST00000597278 2719 ntBASIC9.65□□□□□ -0.86
LCA10Q71F78 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC9.65□□□□□ -0.86
LCA10Q71F78 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC9.65□□□□□ -0.86
LCA10Q71F78 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.65□□□□□ -0.86
LCA10Q71F78 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC9.65□□□□□ -0.86
LCA10Q71F78 DUX4L16-201ENST00000555130 1264 ntBASIC9.65□□□□□ -0.86
LCA10Q71F78 C2orf69P4-201ENST00000565394 541 ntBASIC9.65□□□□□ -0.86
LCA10Q71F78 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC9.65□□□□□ -0.86
LCA10Q71F78 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
LCA10Q71F78 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC9.65□□□□□ -0.86
LCA10Q71F78 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LCA10Q71F78 AC104640.1-201ENST00000562617 2109 ntBASIC9.65□□□□□ -0.86
LCA10Q71F78 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
LCA10Q71F78 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC9.65□□□□□ -0.87
LCA10Q71F78 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
LCA10Q71F78 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC9.65□□□□□ -0.87
LCA10Q71F78 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
LCA10Q71F78 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
LCA10Q71F78 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC9.65□□□□□ -0.87
LCA10Q71F78 AL023775.1-201ENST00000454907 1746 ntBASIC9.65□□□□□ -0.87
LCA10Q71F78 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
LCA10Q71F78 AL731571.1-201ENST00000617058 5428 ntBASIC9.65□□□□□ -0.87
LCA10Q71F78 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LCA10Q71F78 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms