Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC090616.6-201ENST00000582640 721 ntBASIC16.75■□□□□ 0.27
RTL4Q6ZR62 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC092329.2-201ENST00000598402 547 ntBASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC092119.3-201ENST00000612618 583 ntBASIC16.75■□□□□ 0.27
RTL4Q6ZR62 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC093677.2-201ENST00000600169 1863 ntBASIC16.75■□□□□ 0.27
RTL4Q6ZR62 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTL4Q6ZR62 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTL4Q6ZR62 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 KRT18P1-202ENST00000452408 1331 ntBASIC16.73■□□□□ 0.27
RTL4Q6ZR62 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 AP002414.4-201ENST00000589764 1148 ntBASIC16.73■□□□□ 0.27
RTL4Q6ZR62 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 AL353692.3-201ENST00000407031 1396 ntBASIC16.73■□□□□ 0.27
RTL4Q6ZR62 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL4Q6ZR62 AC106820.2-201ENST00000563775 3264 ntBASIC16.72■□□□□ 0.27
RTL4Q6ZR62 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RTL4Q6ZR62 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms