Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 PTCHD3P3-201ENST00000403073 906 ntBASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 AC116407.2-201ENST00000613639 860 ntBASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC141Q6ZP82 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
CCDC141Q6ZP82 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 LINC00982-205ENST00000420957 435 ntBASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 ACTG1P4-201ENST00000425123 1122 ntBASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 AC096734.2-201ENST00000562054 433 ntBASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.39■■□□□ 1.82
CCDC141Q6ZP82 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC141Q6ZP82 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC141Q6ZP82 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC141Q6ZP82 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.39■■□□□ 1.81
CCDC141Q6ZP82 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CD82-202ENST00000342935 967 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 IGHV3-52-201ENST00000519770 353 ntBASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 SNHG9-202ENST00000564014 471 ntBASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AL031432.2-201ENST00000566714 459 ntBASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AL928711.1-201ENST00000570165 459 ntBASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CITED2-204ENST00000618718 901 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 AC097637.2-201ENST00000624096 1997 ntBASIC26.38■■□□□ 1.81
CCDC141Q6ZP82 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC141Q6ZP82 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 AC004877.2-201ENST00000623941 599 ntBASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 PON3-203ENST00000427422 894 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 AP000344.2-201ENST00000512987 629 ntBASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 GGTLC5P-201ENST00000617623 998 ntBASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 AQP6-205ENST00000618286 829 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC141Q6ZP82 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC141Q6ZP82 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CCDC141Q6ZP82 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms