Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 COX5BP2-201ENST00000392354 334 ntBASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRAT1Q6PJG6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 AC009949.1-201ENST00000623048 1830 ntBASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRAT1Q6PJG6 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 BX276092.7-203ENST00000637198 1536 ntBASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
BRAT1Q6PJG6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 AC103564.2-201ENST00000432853 1299 ntBASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 AC132008.2-207ENST00000454517 770 ntBASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms