Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FAM8A3P-201ENST00000427218 844 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 ACTG1P14-201ENST00000446382 1122 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 STK19B-204ENST00000512515 211 ntBASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CNKSR3Q6P9H4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 RHOQP3-201ENST00000437982 621 ntBASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 AP000344.2-201ENST00000512987 629 ntBASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 STK25P1-201ENST00000585406 838 ntBASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNKSR3Q6P9H4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 FAM58CP-201ENST00000435741 640 ntBASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 AC011467.4-201ENST00000594891 528 ntBASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 AL031598.1-201ENST00000561511 1773 ntBASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNKSR3Q6P9H4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC097637.2-201ENST00000624096 1997 ntBASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 TSEN15P1-201ENST00000423257 515 ntBASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 AC074386.1-202ENST00000463561 864 ntBASIC19.05■□□□□ 0.64
CNKSR3Q6P9H4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms