Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KCNA1Q09470 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNA1Q09470 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNA1Q09470 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNA1Q09470 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KCNA1Q09470 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA1Q09470 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KCNA1Q09470 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 ATP5G2P1-201ENST00000433580 426 ntBASIC19.6■□□□□ 0.73
KCNA1Q09470 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.6■□□□□ 0.73
KCNA1Q09470 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.6■□□□□ 0.73
KCNA1Q09470 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA1Q09470 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KCNA1Q09470 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA1Q09470 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA1Q09470 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNA1Q09470 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNA1Q09470 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 AC233702.3-201ENST00000578656 1387 ntBASIC19.59■□□□□ 0.73
KCNA1Q09470 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.59■□□□□ 0.73
KCNA1Q09470 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.59■□□□□ 0.73
KCNA1Q09470 TOB2P1-201ENST00000469761 992 ntBASIC19.59■□□□□ 0.73
KCNA1Q09470 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.59■□□□□ 0.73
KCNA1Q09470 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.59■□□□□ 0.73
KCNA1Q09470 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
KCNA1Q09470 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNA1Q09470 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KCNA1Q09470 REXO1L11P-201ENST00000620964 1927 ntBASIC19.59■□□□□ 0.73
KCNA1Q09470 AL355312.1-201ENST00000407115 2176 ntBASIC19.59■□□□□ 0.73
KCNA1Q09470 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
KCNA1Q09470 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KCNA1Q09470 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.58■□□□□ 0.73
KCNA1Q09470 AC010460.3-201ENST00000511359 1579 ntBASIC19.58■□□□□ 0.73
KCNA1Q09470 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KCNA1Q09470 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KCNA1Q09470 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KCNA1Q09470 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
KCNA1Q09470 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.58■□□□□ 0.72
KCNA1Q09470 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.58■□□□□ 0.72
KCNA1Q09470 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.58■□□□□ 0.72
KCNA1Q09470 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.58■□□□□ 0.72
KCNA1Q09470 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.58■□□□□ 0.72
KCNA1Q09470 AC011840.4-201ENST00000578471 627 ntBASIC19.58■□□□□ 0.72
KCNA1Q09470 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.58■□□□□ 0.72
KCNA1Q09470 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.58■□□□□ 0.72
KCNA1Q09470 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNA1Q09470 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.58■□□□□ 0.72
KCNA1Q09470 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
KCNA1Q09470 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.57■□□□□ 0.72
KCNA1Q09470 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.57■□□□□ 0.72
KCNA1Q09470 GNAS-203ENST00000306120 1878 ntBASIC19.57■□□□□ 0.72
KCNA1Q09470 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.57■□□□□ 0.72
KCNA1Q09470 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNA1Q09470 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms