Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBE3AQ05086 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBE3AQ05086 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3AQ05086 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3AQ05086 NCF1C-201ENST00000438382 1427 ntBASIC18.83■□□□□ 0.61
UBE3AQ05086 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3AQ05086 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
UBE3AQ05086 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
UBE3AQ05086 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3AQ05086 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBE3AQ05086 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBE3AQ05086 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE3AQ05086 VN2R19P-201ENST00000442399 1052 ntBASIC18.83■□□□□ 0.6
UBE3AQ05086 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.83■□□□□ 0.6
UBE3AQ05086 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.83■□□□□ 0.6
UBE3AQ05086 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
UBE3AQ05086 AL596442.2-201ENST00000610240 980 ntBASIC18.83■□□□□ 0.6
UBE3AQ05086 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.83■□□□□ 0.6
UBE3AQ05086 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
UBE3AQ05086 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBE3AQ05086 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3AQ05086 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.82■□□□□ 0.6
UBE3AQ05086 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBE3AQ05086 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBE3AQ05086 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 ELK2BP-201ENST00000415014 1224 ntBASIC18.82■□□□□ 0.6
UBE3AQ05086 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UBE3AQ05086 MKNK2P1-201ENST00000437526 628 ntBASIC18.82■□□□□ 0.6
UBE3AQ05086 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.82■□□□□ 0.6
UBE3AQ05086 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBE3AQ05086 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
UBE3AQ05086 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 AFG3L1P-217ENST00000557444 2447 ntBASIC18.82■□□□□ 0.6
UBE3AQ05086 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBE3AQ05086 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 ESPNP-201ENST00000270691 2015 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBE3AQ05086 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBE3AQ05086 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 METTL21AP1-201ENST00000438852 635 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.81■□□□□ 0.6
UBE3AQ05086 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 IGHV3-65-201ENST00000523210 341 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
UBE3AQ05086 MIR4469-201ENST00000583919 79 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 AC008667.4-201ENST00000607370 168 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 AC093010.1-201ENST00000473625 1624 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBE3AQ05086 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms