Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTNAP1P78357 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP1P78357 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 OR8S1-201ENST00000310194 1080 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 AC236430.1-201ENST00000402231 743 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 PRYP5-201ENST00000451909 266 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 AC108073.2-201ENST00000464002 357 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP1P78357 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 AC093214.1-201ENST00000511688 1107 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 AL359881.2-201ENST00000602973 570 ntBASIC21.1■□□□□ 0.97
CNTNAP1P78357 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP1P78357 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 FAM58CP-201ENST00000435741 640 ntBASIC21.09■□□□□ 0.97
CNTNAP1P78357 AC002472.2-201ENST00000442739 958 ntBASIC21.09■□□□□ 0.97
CNTNAP1P78357 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP1P78357 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP1P78357 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP1P78357 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
CNTNAP1P78357 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CNTNAP1P78357 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP1P78357 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.08■□□□□ 0.97
CNTNAP1P78357 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
CNTNAP1P78357 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 AC004461.1-201ENST00000412461 403 ntBASIC21.08■□□□□ 0.96
CNTNAP1P78357 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.08■□□□□ 0.96
CNTNAP1P78357 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 MIR6752-201ENST00000618442 71 ntBASIC21.08■□□□□ 0.96
CNTNAP1P78357 AC073592.5-201ENST00000624854 528 ntBASIC21.08■□□□□ 0.96
CNTNAP1P78357 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP1P78357 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CNTNAP1P78357 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP1P78357 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms