Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CLDN2P57739 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLDN2P57739 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN2P57739 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
CLDN2P57739 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN2P57739 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
CLDN2P57739 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN2P57739 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN2P57739 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLDN2P57739 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN2P57739 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CLDN2P57739 BX005266.1-201ENST00000473402 457 ntBASIC17.58■□□□□ 0.4
CLDN2P57739 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN2P57739 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN2P57739 OR7E14P-202ENST00000530490 1290 ntBASIC17.58■□□□□ 0.4
CLDN2P57739 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN2P57739 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN2P57739 AC012640.2-201ENST00000561606 901 ntBASIC17.58■□□□□ 0.4
CLDN2P57739 MTDHP4-201ENST00000600287 670 ntBASIC17.58■□□□□ 0.4
CLDN2P57739 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 AL139288.1-201ENST00000623748 933 ntBASIC17.58■□□□□ 0.4
CLDN2P57739 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN2P57739 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLDN2P57739 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN2P57739 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN2P57739 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLDN2P57739 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN2P57739 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 AC004817.3-201ENST00000602957 2129 ntBASIC17.57■□□□□ 0.4
CLDN2P57739 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 AC100803.2-201ENST00000562459 1963 ntBASIC17.57■□□□□ 0.4
CLDN2P57739 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CLDN2P57739 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN2P57739 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN2P57739 MIR940-201ENST00000401276 94 ntBASIC17.57■□□□□ 0.4
CLDN2P57739 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CLDN2P57739 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 PMS2P1-201ENST00000431037 1228 ntBASIC17.57■□□□□ 0.4
CLDN2P57739 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN2P57739 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN2P57739 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 SIRPAP1-201ENST00000448467 1770 ntBASIC17.57■□□□□ 0.4
CLDN2P57739 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN2P57739 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
CLDN2P57739 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
CLDN2P57739 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN2P57739 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN2P57739 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CLDN2P57739 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN2P57739 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 REXO1L9P-201ENST00000604264 2108 ntBASIC17.56■□□□□ 0.4
CLDN2P57739 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN2P57739 AC092910.1-201ENST00000482027 1129 ntBASIC17.56■□□□□ 0.4
CLDN2P57739 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 AC106730.1-201ENST00000566722 1090 ntBASIC17.56■□□□□ 0.4
CLDN2P57739 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CLDN2P57739 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLDN2P57739 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN2P57739 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms