Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLCN3P51790 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLCN3P51790 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLCN3P51790 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.56■□□□□ 0.72
CLCN3P51790 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLCN3P51790 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.56■□□□□ 0.72
CLCN3P51790 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 AC093909.1-201ENST00000504731 1122 ntBASIC19.56■□□□□ 0.72
CLCN3P51790 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.56■□□□□ 0.72
CLCN3P51790 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.56■□□□□ 0.72
CLCN3P51790 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CLCN3P51790 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
CLCN3P51790 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.56■□□□□ 0.72
CLCN3P51790 AD001527.2-201ENST00000622994 785 ntBASIC19.56■□□□□ 0.72
CLCN3P51790 AF228730.7-201ENST00000641842 219 ntBASIC19.56■□□□□ 0.72
CLCN3P51790 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCN3P51790 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCN3P51790 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 AC004817.3-201ENST00000602957 2129 ntBASIC19.55■□□□□ 0.72
CLCN3P51790 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CLCN3P51790 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCN3P51790 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCN3P51790 AC139887.3-201ENST00000568585 713 ntBASIC19.55■□□□□ 0.72
CLCN3P51790 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 MTDHP4-201ENST00000600287 670 ntBASIC19.55■□□□□ 0.72
CLCN3P51790 AL671883.3-201ENST00000603274 991 ntBASIC19.55■□□□□ 0.72
CLCN3P51790 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLCN3P51790 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CLCN3P51790 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.55■□□□□ 0.72
CLCN3P51790 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCN3P51790 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CLCN3P51790 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 AC012640.2-201ENST00000561606 901 ntBASIC19.54■□□□□ 0.72
CLCN3P51790 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCN3P51790 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCN3P51790 AC116407.3-201ENST00000623905 1129 ntBASIC19.54■□□□□ 0.72
CLCN3P51790 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLCN3P51790 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLCN3P51790 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCN3P51790 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCN3P51790 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 AC079776.2-201ENST00000641154 1609 ntBASIC19.54■□□□□ 0.72
CLCN3P51790 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCN3P51790 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN3P51790 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms