Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BRCC3P46736 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.94■□□□□ 0.62
BRCC3P46736 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.94■□□□□ 0.62
BRCC3P46736 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 AC012640.2-201ENST00000561606 901 ntBASIC18.94■□□□□ 0.62
BRCC3P46736 MTDHP4-201ENST00000600287 670 ntBASIC18.94■□□□□ 0.62
BRCC3P46736 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BRCC3P46736 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.94■□□□□ 0.62
BRCC3P46736 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BRCC3P46736 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
BRCC3P46736 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
BRCC3P46736 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.93■□□□□ 0.62
BRCC3P46736 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 OR7E14P-202ENST00000530490 1290 ntBASIC18.93■□□□□ 0.62
BRCC3P46736 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
BRCC3P46736 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.93■□□□□ 0.62
BRCC3P46736 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRCC3P46736 AC079776.2-201ENST00000641154 1609 ntBASIC18.92■□□□□ 0.62
BRCC3P46736 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
BRCC3P46736 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.92■□□□□ 0.62
BRCC3P46736 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.92■□□□□ 0.62
BRCC3P46736 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BRCC3P46736 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.92■□□□□ 0.62
BRCC3P46736 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRCC3P46736 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BRCC3P46736 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
BRCC3P46736 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRCC3P46736 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms