Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC104692.2-201ENST00000603054 253 ntBASIC18.8■□□□□ 0.6
GRIK1P39086 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.8■□□□□ 0.6
GRIK1P39086 KRT8P10-201ENST00000450021 1447 ntBASIC18.8■□□□□ 0.6
GRIK1P39086 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.8■□□□□ 0.6
GRIK1P39086 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
GRIK1P39086 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GRIK1P39086 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.79■□□□□ 0.6
GRIK1P39086 FAM220CP-201ENST00000395253 831 ntBASIC18.79■□□□□ 0.6
GRIK1P39086 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 AC096633.1-201ENST00000422446 749 ntBASIC18.79■□□□□ 0.6
GRIK1P39086 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GRIK1P39086 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GRIK1P39086 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
GRIK1P39086 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GRIK1P39086 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
GRIK1P39086 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GRIK1P39086 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GRIK1P39086 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GRIK1P39086 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.78■□□□□ 0.6
GRIK1P39086 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.78■□□□□ 0.6
GRIK1P39086 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 AC008608.2-201ENST00000606089 416 ntBASIC18.78■□□□□ 0.6
GRIK1P39086 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GRIK1P39086 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GRIK1P39086 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.78■□□□□ 0.6
GRIK1P39086 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.77■□□□□ 0.6
GRIK1P39086 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
GRIK1P39086 AC100803.2-201ENST00000562459 1963 ntBASIC18.77■□□□□ 0.6
GRIK1P39086 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
GRIK1P39086 AC010460.3-201ENST00000511359 1579 ntBASIC18.77■□□□□ 0.6
GRIK1P39086 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.77■□□□□ 0.6
GRIK1P39086 AC009078.2-202ENST00000463353 338 ntBASIC18.77■□□□□ 0.6
GRIK1P39086 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.77■□□□□ 0.6
GRIK1P39086 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.77■□□□□ 0.6
GRIK1P39086 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.77■□□□□ 0.6
GRIK1P39086 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GRIK1P39086 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms