Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SNCAP37840 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SNCAP37840 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 AP000593.1-201ENST00000393668 712 ntBASIC14.73□□□□□ -0.05
SNCAP37840 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 MIR6786-201ENST00000616843 113 ntBASIC14.73□□□□□ -0.05
SNCAP37840 FAM197Y4-202ENST00000622692 608 ntBASIC14.73□□□□□ -0.05
SNCAP37840 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SNCAP37840 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SNCAP37840 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.73□□□□□ -0.05
SNCAP37840 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SNCAP37840 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.73□□□□□ -0.05
SNCAP37840 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
SNCAP37840 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 MST1L-201ENST00000442552 2185 ntBASIC14.72□□□□□ -0.05
SNCAP37840 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.72□□□□□ -0.05
SNCAP37840 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SNCAP37840 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNCAP37840 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 AC008556.1-201ENST00000610908 2040 ntBASIC14.71□□□□□ -0.05
SNCAP37840 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.71□□□□□ -0.05
SNCAP37840 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.71□□□□□ -0.05
SNCAP37840 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.71□□□□□ -0.05
SNCAP37840 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.71□□□□□ -0.05
SNCAP37840 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.71□□□□□ -0.05
SNCAP37840 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 RPPH1-201ENST00000516869 333 ntBASIC14.71□□□□□ -0.05
SNCAP37840 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.71□□□□□ -0.05
SNCAP37840 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.71□□□□□ -0.05
SNCAP37840 AL135905.2-201ENST00000584934 1404 ntBASIC14.71□□□□□ -0.05
SNCAP37840 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SNCAP37840 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNCAP37840 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
SNCAP37840 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNCAP37840 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNCAP37840 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SNCAP37840 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.71□□□□□ -0.06
SNCAP37840 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SNCAP37840 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 FLJ16779-201ENST00000612722 7638 ntBASIC14.7□□□□□ -0.06
SNCAP37840 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms