Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
COPB2P35606 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.34■□□□□ 0.85
COPB2P35606 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
COPB2P35606 SPDYE21P-201ENST00000413323 827 ntBASIC20.34■□□□□ 0.85
COPB2P35606 BX005266.1-201ENST00000473402 457 ntBASIC20.34■□□□□ 0.85
COPB2P35606 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.34■□□□□ 0.85
COPB2P35606 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.34■□□□□ 0.85
COPB2P35606 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.34■□□□□ 0.85
COPB2P35606 AL356488.2-201ENST00000602755 427 ntBASIC20.34■□□□□ 0.85
COPB2P35606 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
COPB2P35606 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPB2P35606 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.34■□□□□ 0.85
COPB2P35606 PHGDH-209ENST00000641074 1780 ntBASIC20.34■□□□□ 0.85
COPB2P35606 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
COPB2P35606 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPB2P35606 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.33■□□□□ 0.85
COPB2P35606 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 KRT18P3-201ENST00000451602 1288 ntBASIC20.33■□□□□ 0.85
COPB2P35606 UNC93B6-202ENST00000528242 690 ntBASIC20.33■□□□□ 0.85
COPB2P35606 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
COPB2P35606 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
COPB2P35606 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.33■□□□□ 0.85
COPB2P35606 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPB2P35606 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPB2P35606 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
COPB2P35606 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COPB2P35606 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPB2P35606 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COPB2P35606 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
COPB2P35606 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COPB2P35606 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COPB2P35606 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COPB2P35606 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 AP002414.3-201ENST00000589352 1468 ntBASIC20.32■□□□□ 0.84
COPB2P35606 AC126763.1-201ENST00000552015 2118 ntBASIC20.32■□□□□ 0.84
COPB2P35606 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COPB2P35606 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.32■□□□□ 0.84
COPB2P35606 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.32■□□□□ 0.84
COPB2P35606 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 KRT18P27-201ENST00000427733 1299 ntBASIC20.32■□□□□ 0.84
COPB2P35606 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.32■□□□□ 0.84
COPB2P35606 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.32■□□□□ 0.84
COPB2P35606 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.32■□□□□ 0.84
COPB2P35606 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 AC040169.1-201ENST00000565382 521 ntBASIC20.32■□□□□ 0.84
COPB2P35606 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COPB2P35606 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.32■□□□□ 0.84
COPB2P35606 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.32■□□□□ 0.84
COPB2P35606 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COPB2P35606 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPB2P35606 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.31■□□□□ 0.84
COPB2P35606 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.31■□□□□ 0.84
COPB2P35606 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.31■□□□□ 0.84
COPB2P35606 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPB2P35606 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms