Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.07■□□□□ 0
COL8A2P25067 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.07■□□□□ 0
COL8A2P25067 AP002469.2-201ENST00000531724 424 ntBASIC15.07■□□□□ 0
COL8A2P25067 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.07■□□□□ 0
COL8A2P25067 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.07■□□□□ 0
COL8A2P25067 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 AC135776.1-201ENST00000319817 2481 ntBASIC15.07■□□□□ 0
COL8A2P25067 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL8A2P25067 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.07■□□□□ 0
COL8A2P25067 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COL8A2P25067 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.07■□□□□ 0
COL8A2P25067 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.06■□□□□ 0
COL8A2P25067 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 AL096828.2-201ENST00000567259 1965 ntBASIC15.06■□□□□ 0
COL8A2P25067 AC138932.1-201ENST00000534164 6830 ntBASIC15.06■□□□□ 0
COL8A2P25067 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.06■□□□□ 0
COL8A2P25067 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.06■□□□□ 0
COL8A2P25067 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.06■□□□□ 0
COL8A2P25067 AC011467.2-201ENST00000598425 242 ntBASIC15.06■□□□□ 0
COL8A2P25067 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.06■□□□□ 0
COL8A2P25067 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL8A2P25067 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.06■□□□□ 0
COL8A2P25067 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.06■□□□□ 0
COL8A2P25067 AC093677.2-201ENST00000600169 1863 ntBASIC15.06■□□□□ 0
COL8A2P25067 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL8A2P25067 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.05■□□□□ 0
COL8A2P25067 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
COL8A2P25067 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
COL8A2P25067 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
COL8A2P25067 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL8A2P25067 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
COL8A2P25067 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.05■□□□□ 0
COL8A2P25067 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 MRPL3P1-201ENST00000400109 1033 ntBASIC15.05■□□□□ -0
COL8A2P25067 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.05■□□□□ -0
COL8A2P25067 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.05■□□□□ -0
COL8A2P25067 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.05■□□□□ -0
COL8A2P25067 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.05■□□□□ -0
COL8A2P25067 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.05■□□□□ -0
COL8A2P25067 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.05■□□□□ -0
COL8A2P25067 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.05■□□□□ -0
COL8A2P25067 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.05■□□□□ -0
COL8A2P25067 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
COL8A2P25067 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
COL8A2P25067 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.05■□□□□ -0
COL8A2P25067 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.05■□□□□ -0
COL8A2P25067 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.05■□□□□ -0
COL8A2P25067 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.05■□□□□ -0
COL8A2P25067 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
COL8A2P25067 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 AL390961.4-201ENST00000623958 2535 ntBASIC15.05■□□□□ -0
COL8A2P25067 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL8A2P25067 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL8A2P25067 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL8A2P25067 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL8A2P25067 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL8A2P25067 AC067852.2-201ENST00000590513 2313 ntBASIC15.04■□□□□ -0
COL8A2P25067 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms