Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF4P23510 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF4P23510 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF4P23510 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TNFSF4P23510 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF4P23510 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TNFSF4P23510 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TNFSF4P23510 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.27■□□□□ 0.03
TNFSF4P23510 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF4P23510 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.27■□□□□ 0.03
TNFSF4P23510 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF4P23510 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TNFSF4P23510 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.27■□□□□ 0.03
TNFSF4P23510 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 REXO1L9P-201ENST00000604264 2108 ntBASIC15.26■□□□□ 0.03
TNFSF4P23510 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
TNFSF4P23510 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNFSF4P23510 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.26■□□□□ 0.03
TNFSF4P23510 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 TOB2P1-201ENST00000469761 992 ntBASIC15.26■□□□□ 0.03
TNFSF4P23510 RN7SL606P-201ENST00000472779 293 ntBASIC15.26■□□□□ 0.03
TNFSF4P23510 AC068472.1-201ENST00000474589 881 ntBASIC15.26■□□□□ 0.03
TNFSF4P23510 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.26■□□□□ 0.03
TNFSF4P23510 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF4P23510 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF4P23510 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF4P23510 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TNFSF4P23510 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 AC104819.1-201ENST00000504587 486 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFSF4P23510 AC112698.1-201ENST00000510299 916 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 AP000867.3-201ENST00000524675 377 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFSF4P23510 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.25■□□□□ 0.03
TNFSF4P23510 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TNFSF4P23510 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 NPAP1P7-201ENST00000613027 823 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF4P23510 FLJ13224-201ENST00000313737 1514 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 AC020916.1-201ENST00000587762 1774 ntBASIC15.25■□□□□ 0.03
TNFSF4P23510 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF4P23510 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF4P23510 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF4P23510 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFSF4P23510 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms