Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC009949.1-201ENST00000623048 1830 ntBASIC18.9■□□□□ 0.62
CCDC130P13994 TP73-AS1-210ENST00000637775 1455 ntBASIC18.9■□□□□ 0.62
CCDC130P13994 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CCDC130P13994 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 TSPY19P-201ENST00000418461 509 ntBASIC18.9■□□□□ 0.62
CCDC130P13994 TSPY18P-201ENST00000441642 509 ntBASIC18.9■□□□□ 0.62
CCDC130P13994 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.9■□□□□ 0.62
CCDC130P13994 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC130P13994 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC130P13994 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC130P13994 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC130P13994 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC130P13994 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC130P13994 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC130P13994 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC130P13994 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC130P13994 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC130P13994 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CCDC130P13994 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC130P13994 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC130P13994 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC130P13994 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC130P13994 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 RCN1P2-201ENST00000398357 915 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC130P13994 KRT18P31-201ENST00000506277 1292 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC130P13994 KRT126P-201ENST00000549467 1181 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC130P13994 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC130P13994 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC130P13994 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 KRT18P55-202ENST00000578578 1546 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 AC010460.3-201ENST00000511359 1579 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.89■□□□□ 0.61
CCDC130P13994 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC130P13994 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC130P13994 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC130P13994 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 AC018470.1-201ENST00000624790 3129 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC130P13994 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
CCDC130P13994 AL450487.1-201ENST00000426799 995 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 AC007967.3-201ENST00000434308 558 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC130P13994 UNC93B7-201ENST00000509439 705 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC130P13994 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC130P13994 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC130P13994 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC130P13994 AL121772.3-201ENST00000610840 674 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 AC114341.1-201ENST00000618070 349 ntBASIC18.88■□□□□ 0.61
CCDC130P13994 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC130P13994 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms