Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
BMP3P12645 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.54■□□□□ 0.88
BMP3P12645 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.54■□□□□ 0.88
BMP3P12645 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
BMP3P12645 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
BMP3P12645 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BMP3P12645 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 AC009949.1-201ENST00000623048 1830 ntBASIC20.53■□□□□ 0.88
BMP3P12645 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BMP3P12645 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 AL020996.1-203ENST00000536896 2307 ntBASIC20.53■□□□□ 0.88
BMP3P12645 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
BMP3P12645 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.53■□□□□ 0.88
BMP3P12645 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.53■□□□□ 0.88
BMP3P12645 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.53■□□□□ 0.88
BMP3P12645 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.53■□□□□ 0.88
BMP3P12645 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.53■□□□□ 0.88
BMP3P12645 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BMP3P12645 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.53■□□□□ 0.88
BMP3P12645 AC073592.4-201ENST00000623827 446 ntBASIC20.53■□□□□ 0.88
BMP3P12645 AC073592.5-201ENST00000624854 528 ntBASIC20.53■□□□□ 0.88
BMP3P12645 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BMP3P12645 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.52■□□□□ 0.88
BMP3P12645 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.52■□□□□ 0.88
BMP3P12645 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.52■□□□□ 0.88
BMP3P12645 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 AL049757.1-201ENST00000616842 1596 ntBASIC20.52■□□□□ 0.88
BMP3P12645 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.52■□□□□ 0.88
BMP3P12645 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.52■□□□□ 0.88
BMP3P12645 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.52■□□□□ 0.88
BMP3P12645 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
BMP3P12645 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BMP3P12645 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.52■□□□□ 0.87
BMP3P12645 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.52■□□□□ 0.87
BMP3P12645 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BMP3P12645 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 AL353593.2-201ENST00000602529 1483 ntBASIC20.51■□□□□ 0.87
BMP3P12645 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
BMP3P12645 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 SPDYE21P-201ENST00000413323 827 ntBASIC20.51■□□□□ 0.87
BMP3P12645 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 DDX43P3-201ENST00000441064 443 ntBASIC20.51■□□□□ 0.87
BMP3P12645 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.51■□□□□ 0.87
BMP3P12645 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.51■□□□□ 0.87
BMP3P12645 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.51■□□□□ 0.87
BMP3P12645 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.51■□□□□ 0.87
BMP3P12645 AC012640.2-201ENST00000561606 901 ntBASIC20.51■□□□□ 0.87
BMP3P12645 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 AL671883.3-201ENST00000603274 991 ntBASIC20.51■□□□□ 0.87
BMP3P12645 AL022326.1-202ENST00000641533 845 ntBASIC20.51■□□□□ 0.87
BMP3P12645 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BMP3P12645 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
BMP3P12645 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.51■□□□□ 0.87
BMP3P12645 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BMP3P12645 SIGLEC16-201ENST00000599858 1437 ntBASIC20.51■□□□□ 0.87
BMP3P12645 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.51■□□□□ 0.87
BMP3P12645 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms