Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC096582.2-201ENST00000510860 516 ntBASIC20.96■□□□□ 0.95
TOP1P11387 AC009533.2-201ENST00000543664 586 ntBASIC20.96■□□□□ 0.95
TOP1P11387 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.96■□□□□ 0.95
TOP1P11387 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.96■□□□□ 0.95
TOP1P11387 RN7SL510P-201ENST00000581311 263 ntBASIC20.96■□□□□ 0.95
TOP1P11387 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.96■□□□□ 0.95
TOP1P11387 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 AL121894.2-201ENST00000602977 491 ntBASIC20.96■□□□□ 0.95
TOP1P11387 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
TOP1P11387 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TOP1P11387 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TOP1P11387 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TOP1P11387 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 TP73-AS1-210ENST00000637775 1455 ntBASIC20.95■□□□□ 0.94
TOP1P11387 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TOP1P11387 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TOP1P11387 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.95■□□□□ 0.94
TOP1P11387 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.95■□□□□ 0.94
TOP1P11387 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.95■□□□□ 0.94
TOP1P11387 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.95■□□□□ 0.94
TOP1P11387 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.95■□□□□ 0.94
TOP1P11387 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.95■□□□□ 0.94
TOP1P11387 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TOP1P11387 AC114341.1-201ENST00000618070 349 ntBASIC20.95■□□□□ 0.94
TOP1P11387 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.95■□□□□ 0.94
TOP1P11387 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TOP1P11387 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TOP1P11387 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TOP1P11387 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 TPM4P1-201ENST00000436100 807 ntBASIC20.94■□□□□ 0.94
TOP1P11387 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.94■□□□□ 0.94
TOP1P11387 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.94■□□□□ 0.94
TOP1P11387 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.94■□□□□ 0.94
TOP1P11387 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.94■□□□□ 0.94
TOP1P11387 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.94■□□□□ 0.94
TOP1P11387 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 LINC01711-201ENST00000598340 967 ntBASIC20.94■□□□□ 0.94
TOP1P11387 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.94■□□□□ 0.94
TOP1P11387 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.94■□□□□ 0.94
TOP1P11387 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TOP1P11387 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TOP1P11387 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOP1P11387 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.94■□□□□ 0.94
TOP1P11387 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.93■□□□□ 0.94
TOP1P11387 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 MIR5100-201ENST00000579544 119 ntBASIC20.93■□□□□ 0.94
TOP1P11387 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.93■□□□□ 0.94
TOP1P11387 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 KRT8P47-201ENST00000604727 1398 ntBASIC20.93■□□□□ 0.94
TOP1P11387 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOP1P11387 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms