Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.01■□□□□ 0.79
GGPS1O95749 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.01■□□□□ 0.79
GGPS1O95749 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.01■□□□□ 0.79
GGPS1O95749 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 AC093677.2-201ENST00000600169 1863 ntBASIC20.01■□□□□ 0.79
GGPS1O95749 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20■□□□□ 0.79
GGPS1O95749 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20■□□□□ 0.79
GGPS1O95749 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20■□□□□ 0.79
GGPS1O95749 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20■□□□□ 0.79
GGPS1O95749 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20■□□□□ 0.79
GGPS1O95749 NKAPP1-205ENST00000585790 367 ntBASIC20■□□□□ 0.79
GGPS1O95749 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20■□□□□ 0.79
GGPS1O95749 AL139288.1-201ENST00000623748 933 ntBASIC20■□□□□ 0.79
GGPS1O95749 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 AC135050.7-201ENST00000624508 2218 ntBASIC20■□□□□ 0.79
GGPS1O95749 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20■□□□□ 0.79
GGPS1O95749 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
GGPS1O95749 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20■□□□□ 0.79
GGPS1O95749 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20■□□□□ 0.79
GGPS1O95749 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.99■□□□□ 0.79
GGPS1O95749 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 RPS2P28-201ENST00000314255 741 ntBASIC19.99■□□□□ 0.79
GGPS1O95749 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GGPS1O95749 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.99■□□□□ 0.79
GGPS1O95749 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 AC025062.2-201ENST00000605477 670 ntBASIC19.99■□□□□ 0.79
GGPS1O95749 AC116407.3-201ENST00000623905 1129 ntBASIC19.99■□□□□ 0.79
GGPS1O95749 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
GGPS1O95749 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GGPS1O95749 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.98■□□□□ 0.79
GGPS1O95749 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.98■□□□□ 0.79
GGPS1O95749 AC135776.1-201ENST00000319817 2481 ntBASIC19.98■□□□□ 0.79
GGPS1O95749 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
GGPS1O95749 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
GGPS1O95749 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 MIR574-201ENST00000385209 96 ntBASIC19.98■□□□□ 0.79
GGPS1O95749 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
GGPS1O95749 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.98■□□□□ 0.79
GGPS1O95749 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 AC122714.2-201ENST00000502787 707 ntBASIC19.98■□□□□ 0.79
GGPS1O95749 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.98■□□□□ 0.79
GGPS1O95749 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.98■□□□□ 0.79
GGPS1O95749 AC023511.2-201ENST00000618803 211 ntBASIC19.98■□□□□ 0.79
GGPS1O95749 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.98■□□□□ 0.79
GGPS1O95749 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 AC104581.1-202ENST00000635932 2618 ntBASIC19.98■□□□□ 0.79
GGPS1O95749 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GGPS1O95749 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
GGPS1O95749 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
GGPS1O95749 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GGPS1O95749 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms