Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
HERC2O95714 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.88□□□□□ -0.67
HERC2O95714 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC10.88□□□□□ -0.67
HERC2O95714 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.88□□□□□ -0.67
HERC2O95714 MIR33B-201ENST00000385104 96 ntBASIC10.88□□□□□ -0.67
HERC2O95714 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.88□□□□□ -0.67
HERC2O95714 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 KRT18P41-201ENST00000518924 1277 ntBASIC10.88□□□□□ -0.67
HERC2O95714 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.88□□□□□ -0.67
HERC2O95714 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 AC135586.1-201ENST00000539323 574 ntBASIC10.88□□□□□ -0.67
HERC2O95714 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.88□□□□□ -0.67
HERC2O95714 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HERC2O95714 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
HERC2O95714 RARRES2P8-201ENST00000566335 367 ntBASIC10.87□□□□□ -0.67
HERC2O95714 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC10.87□□□□□ -0.67
HERC2O95714 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 BRWD1P1-201ENST00000401091 371 ntBASIC10.87□□□□□ -0.67
HERC2O95714 AC087499.6-201ENST00000411576 835 ntBASIC10.87□□□□□ -0.67
HERC2O95714 KRT18P66-201ENST00000452970 1269 ntBASIC10.87□□□□□ -0.67
HERC2O95714 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.87□□□□□ -0.67
HERC2O95714 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 MIR6756-201ENST00000616240 63 ntBASIC10.87□□□□□ -0.67
HERC2O95714 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
HERC2O95714 Z98882.1-201ENST00000622160 2253 ntBASIC10.87□□□□□ -0.67
HERC2O95714 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
HERC2O95714 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.87□□□□□ -0.67
HERC2O95714 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
HERC2O95714 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 AC026954.1-201ENST00000429771 1293 ntBASIC10.87□□□□□ -0.67
HERC2O95714 CALR4P-201ENST00000431943 946 ntBASIC10.87□□□□□ -0.67
HERC2O95714 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.87□□□□□ -0.67
HERC2O95714 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.87□□□□□ -0.67
HERC2O95714 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HERC2O95714 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.87□□□□□ -0.67
HERC2O95714 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC10.87□□□□□ -0.67
HERC2O95714 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.87□□□□□ -0.67
HERC2O95714 MIR4453-201ENST00000584019 89 ntBASIC10.87□□□□□ -0.67
HERC2O95714 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HERC2O95714 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC10.87□□□□□ -0.67
HERC2O95714 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HERC2O95714 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HERC2O95714 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC10.86□□□□□ -0.67
HERC2O95714 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HERC2O95714 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HERC2O95714 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
HERC2O95714 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
HERC2O95714 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.86□□□□□ -0.67
HERC2O95714 NUS1P3-201ENST00000423502 862 ntBASIC10.86□□□□□ -0.67
HERC2O95714 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
HERC2O95714 AC114501.2-201ENST00000439631 535 ntBASIC10.86□□□□□ -0.67
HERC2O95714 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.86□□□□□ -0.67
HERC2O95714 AC114501.1-201ENST00000445949 172 ntBASIC10.86□□□□□ -0.67
HERC2O95714 KRT8P13-201ENST00000463294 1010 ntBASIC10.86□□□□□ -0.67
HERC2O95714 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC10.86□□□□□ -0.67
HERC2O95714 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.86□□□□□ -0.67
HERC2O95714 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.86□□□□□ -0.67
HERC2O95714 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HERC2O95714 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms