Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH8O95206 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDH8O95206 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH8O95206 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 HLA-A-201ENST00000376802 1334 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDH8O95206 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH8O95206 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDH8O95206 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 AC007967.3-201ENST00000434308 558 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 SCARNA2-201ENST00000458748 420 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 DUTP2-201ENST00000519164 463 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 AL773604.1-201ENST00000617417 272 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH8O95206 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDH8O95206 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH8O95206 AP005117.1-201ENST00000584346 1413 ntBASIC17.81■□□□□ 0.44
PCDH8O95206 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDH8O95206 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 AC097374.2-201ENST00000618617 1306 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 AL138781.2-201ENST00000617896 1843 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH8O95206 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 KRT18P67-201ENST00000432816 1264 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH8O95206 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 FGFR3P6-201ENST00000457012 610 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH8O95206 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH8O95206 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 AC073648.2-201ENST00000510116 352 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 AP001005.1-201ENST00000571755 1248 ntBASIC17.8■□□□□ 0.44
PCDH8O95206 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH8O95206 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PCDH8O95206 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDH8O95206 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PCDH8O95206 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH8O95206 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDH8O95206 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH8O95206 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 KRT8P47-201ENST00000604727 1398 ntBASIC17.79■□□□□ 0.44
PCDH8O95206 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH8O95206 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH8O95206 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH8O95206 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH8O95206 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH8O95206 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH8O95206 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH8O95206 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH8O95206 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms