Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.14■□□□□ 0.66
CSPG5O95196 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 AC005332.7-201ENST00000614046 2005 ntBASIC19.14■□□□□ 0.65
CSPG5O95196 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.14■□□□□ 0.65
CSPG5O95196 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 AC040169.1-201ENST00000565382 521 ntBASIC19.14■□□□□ 0.65
CSPG5O95196 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.14■□□□□ 0.65
CSPG5O95196 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CSPG5O95196 AC083906.6-201ENST00000641366 219 ntBASIC19.14■□□□□ 0.65
CSPG5O95196 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.14■□□□□ 0.65
CSPG5O95196 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CSPG5O95196 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSPG5O95196 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.14■□□□□ 0.65
CSPG5O95196 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSPG5O95196 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG5O95196 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSPG5O95196 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.13■□□□□ 0.65
CSPG5O95196 DNAJB3-202ENST00000449667 1266 ntBASIC19.13■□□□□ 0.65
CSPG5O95196 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.13■□□□□ 0.65
CSPG5O95196 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.13■□□□□ 0.65
CSPG5O95196 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG5O95196 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.13■□□□□ 0.65
CSPG5O95196 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 AL139288.1-201ENST00000623748 933 ntBASIC19.13■□□□□ 0.65
CSPG5O95196 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSPG5O95196 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.13■□□□□ 0.65
CSPG5O95196 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
CSPG5O95196 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CSPG5O95196 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSPG5O95196 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.13■□□□□ 0.65
CSPG5O95196 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSPG5O95196 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CSPG5O95196 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSPG5O95196 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CSPG5O95196 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CSPG5O95196 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.12■□□□□ 0.65
CSPG5O95196 DNAJB3-201ENST00000446806 729 ntBASIC19.12■□□□□ 0.65
CSPG5O95196 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.12■□□□□ 0.65
CSPG5O95196 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.12■□□□□ 0.65
CSPG5O95196 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.12■□□□□ 0.65
CSPG5O95196 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.12■□□□□ 0.65
CSPG5O95196 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.12■□□□□ 0.65
CSPG5O95196 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSPG5O95196 AC079781.4-201ENST00000641908 219 ntBASIC19.12■□□□□ 0.65
CSPG5O95196 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSPG5O95196 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms