Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 LETM1P2-201ENST00000597330 2178 ntBASIC16.47■□□□□ 0.23
NKX2-2O95096 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 HCG11-201ENST00000411553 5696 ntBASIC16.47■□□□□ 0.23
NKX2-2O95096 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
NKX2-2O95096 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX2-2O95096 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.47■□□□□ 0.23
NKX2-2O95096 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.47■□□□□ 0.23
NKX2-2O95096 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.47■□□□□ 0.23
NKX2-2O95096 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.47■□□□□ 0.23
NKX2-2O95096 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.47■□□□□ 0.23
NKX2-2O95096 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NKX2-2O95096 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.46■□□□□ 0.23
NKX2-2O95096 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 HLA-J-201ENST00000462773 1622 ntBASIC16.46■□□□□ 0.23
NKX2-2O95096 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX2-2O95096 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 AC246785.2-201ENST00000432512 513 ntBASIC16.46■□□□□ 0.23
NKX2-2O95096 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX2-2O95096 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.46■□□□□ 0.23
NKX2-2O95096 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX2-2O95096 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX2-2O95096 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.46■□□□□ 0.23
NKX2-2O95096 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.46■□□□□ 0.23
NKX2-2O95096 AP000550.4-202ENST00000639755 178 ntBASIC16.46■□□□□ 0.23
NKX2-2O95096 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NKX2-2O95096 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
NKX2-2O95096 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NKX2-2O95096 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
NKX2-2O95096 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NKX2-2O95096 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NKX2-2O95096 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
NKX2-2O95096 AC026471.1-201ENST00000564629 3026 ntBASIC16.45■□□□□ 0.22
NKX2-2O95096 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX2-2O95096 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
NKX2-2O95096 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 TSSC2-201ENST00000450217 709 ntBASIC16.45■□□□□ 0.22
NKX2-2O95096 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX2-2O95096 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.45■□□□□ 0.22
NKX2-2O95096 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 AC011840.4-201ENST00000578471 627 ntBASIC16.45■□□□□ 0.22
NKX2-2O95096 AL445228.2-201ENST00000605589 952 ntBASIC16.45■□□□□ 0.22
NKX2-2O95096 AC010331.1-201ENST00000611423 582 ntBASIC16.45■□□□□ 0.22
NKX2-2O95096 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.45■□□□□ 0.22
NKX2-2O95096 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX2-2O95096 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NKX2-2O95096 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX2-2O95096 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.45■□□□□ 0.22
NKX2-2O95096 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms