Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF4O60810 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF4O60810 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 AC116407.4-201ENST00000623319 1061 ntBASIC17.15■□□□□ 0.34
PRAMEF4O60810 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
PRAMEF4O60810 AC108860.2-201ENST00000562760 2183 ntBASIC17.15■□□□□ 0.34
PRAMEF4O60810 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRAMEF4O60810 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.14■□□□□ 0.34
PRAMEF4O60810 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AC091607.1-201ENST00000490318 1060 ntBASIC17.14■□□□□ 0.33
PRAMEF4O60810 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AL592071.1-201ENST00000611956 408 ntBASIC17.14■□□□□ 0.33
PRAMEF4O60810 AC116407.2-201ENST00000613639 860 ntBASIC17.14■□□□□ 0.33
PRAMEF4O60810 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 SIRPAP1-201ENST00000448467 1770 ntBASIC17.14■□□□□ 0.33
PRAMEF4O60810 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF4O60810 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF4O60810 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC096633.1-201ENST00000422446 749 ntBASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 KRT8P26-201ENST00000534154 1276 ntBASIC17.13■□□□□ 0.33
PRAMEF4O60810 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC010460.3-201ENST00000511359 1579 ntBASIC17.13■□□□□ 0.33
PRAMEF4O60810 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.13■□□□□ 0.33
PRAMEF4O60810 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF4O60810 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC016734.2-201ENST00000624325 1377 ntBASIC17.13■□□□□ 0.33
PRAMEF4O60810 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms