Protein–RNA interactions for Protein: O15205

UBD, Ubiquitin D, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBDO15205 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.3■□□□□ 0.36
UBDO15205 AC107956.1-201ENST00000494359 873 ntBASIC17.3■□□□□ 0.36
UBDO15205 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.3■□□□□ 0.36
UBDO15205 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.3■□□□□ 0.36
UBDO15205 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.3■□□□□ 0.36
UBDO15205 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.3■□□□□ 0.36
UBDO15205 AC113410.3-201ENST00000623366 203 ntBASIC17.3■□□□□ 0.36
UBDO15205 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.3■□□□□ 0.36
UBDO15205 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBDO15205 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
UBDO15205 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.29■□□□□ 0.36
UBDO15205 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.29■□□□□ 0.36
UBDO15205 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UBDO15205 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBDO15205 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
UBDO15205 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.28■□□□□ 0.36
UBDO15205 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 BX088651.1-201ENST00000540551 451 ntBASIC17.28■□□□□ 0.36
UBDO15205 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.28■□□□□ 0.36
UBDO15205 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.28■□□□□ 0.36
UBDO15205 AC116407.2-201ENST00000613639 860 ntBASIC17.28■□□□□ 0.36
UBDO15205 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 AC092338.2-201ENST00000568827 1415 ntBASIC17.28■□□□□ 0.36
UBDO15205 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBDO15205 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBDO15205 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.28■□□□□ 0.36
UBDO15205 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
UBDO15205 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
UBDO15205 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBDO15205 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBDO15205 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBDO15205 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
UBDO15205 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.27■□□□□ 0.36
UBDO15205 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBDO15205 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.27■□□□□ 0.36
UBDO15205 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms