Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP2A1O14983 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 TERC-201ENST00000602385 541 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 FAM197Y3-203ENST00000618346 717 ntBASIC20.37■□□□□ 0.85
ATP2A1O14983 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A1O14983 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP2A1O14983 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A1O14983 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A1O14983 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A1O14983 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ATP2A1O14983 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 KRT18P27-201ENST00000427733 1299 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 RNA5SP415-201ENST00000517246 115 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 Z83851.2-201ENST00000609564 659 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 AC027601.4-201ENST00000611259 610 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 AC139530.3-201ENST00000620344 690 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A1O14983 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 AC098818.2-201ENST00000564925 2320 ntBASIC20.36■□□□□ 0.85
ATP2A1O14983 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A1O14983 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A1O14983 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A1O14983 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A1O14983 AL049757.1-201ENST00000616842 1596 ntBASIC20.35■□□□□ 0.85
ATP2A1O14983 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A1O14983 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP2A1O14983 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A1O14983 AL591424.1-201ENST00000442569 1213 ntBASIC20.35■□□□□ 0.85
ATP2A1O14983 BX005266.1-201ENST00000473402 457 ntBASIC20.35■□□□□ 0.85
ATP2A1O14983 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A1O14983 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP2A1O14983 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.35■□□□□ 0.85
ATP2A1O14983 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A1O14983 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A1O14983 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
ATP2A1O14983 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A1O14983 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A1O14983 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A1O14983 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A1O14983 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A1O14983 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A1O14983 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A1O14983 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A1O14983 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP2A1O14983 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
ATP2A1O14983 AL020996.1-203ENST00000536896 2307 ntBASIC20.34■□□□□ 0.85
ATP2A1O14983 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 AP002414.3-201ENST00000589352 1468 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms