Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP3D1O14617 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 LINC01126-201ENST00000623515 1646 ntBASIC16.74■□□□□ 0.27
AP3D1O14617 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.74■□□□□ 0.27
AP3D1O14617 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP3D1O14617 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 LINC00896-202ENST00000609602 2128 ntBASIC16.73■□□□□ 0.27
AP3D1O14617 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
AP3D1O14617 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3D1O14617 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3D1O14617 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.73■□□□□ 0.27
AP3D1O14617 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.73■□□□□ 0.27
AP3D1O14617 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 AL138966.2-201ENST00000621997 464 ntBASIC16.73■□□□□ 0.27
AP3D1O14617 AC141257.4-201ENST00000634557 245 ntBASIC16.73■□□□□ 0.27
AP3D1O14617 AC136944.6-201ENST00000634818 245 ntBASIC16.73■□□□□ 0.27
AP3D1O14617 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
AP3D1O14617 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP3D1O14617 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3D1O14617 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3D1O14617 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 NEK4P2-201ENST00000580004 1012 ntBASIC16.72■□□□□ 0.27
AP3D1O14617 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
AP3D1O14617 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3D1O14617 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.72■□□□□ 0.27
AP3D1O14617 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AP3D1O14617 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
AP3D1O14617 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
AP3D1O14617 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3D1O14617 AC141586.5-201ENST00000624546 2050 ntBASIC16.71■□□□□ 0.27
AP3D1O14617 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AP3D1O14617 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3D1O14617 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3D1O14617 AC012306.2-201ENST00000609350 630 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms