Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VGLL3A8MV65 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.53■□□□□ 0.4
VGLL3A8MV65 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VGLL3A8MV65 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.52■□□□□ 0.4
VGLL3A8MV65 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VGLL3A8MV65 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.52■□□□□ 0.39
VGLL3A8MV65 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL3A8MV65 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VGLL3A8MV65 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL3A8MV65 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL3A8MV65 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL3A8MV65 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
VGLL3A8MV65 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VGLL3A8MV65 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SLC9A3P3-201ENST00000457608 2229 ntBASIC17.51■□□□□ 0.39
VGLL3A8MV65 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VGLL3A8MV65 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VGLL3A8MV65 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
VGLL3A8MV65 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
VGLL3A8MV65 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VGLL3A8MV65 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.5■□□□□ 0.39
VGLL3A8MV65 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VGLL3A8MV65 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms