Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 AC011270.2-201ENST00000624293 2550 ntBASIC18.52■□□□□ 0.56
SRRM3A6NNA2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SRRM3A6NNA2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.52■□□□□ 0.55
SRRM3A6NNA2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.51■□□□□ 0.55
SRRM3A6NNA2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 AC131212.4-201ENST00000623606 975 ntBASIC18.5■□□□□ 0.55
SRRM3A6NNA2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRRM3A6NNA2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 AC092338.2-201ENST00000568827 1415 ntBASIC18.49■□□□□ 0.55
SRRM3A6NNA2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SRRM3A6NNA2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms